How to submit complete plastid genome sequence to genbank?

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Does anybody know a lab in Australia or New Zealand who carries out in situ hybridization, FISH, GISH with polyploid plants?

01 February 2018 7,177 1 View

Could somebody suggest a good software to analyse AFLP, protein electrophoresis gels?

Possible a software that is: free, has a GUI and capable to export the data to binary, and can make comparison across several gels

08 September 2017 3,207 1 View

Positive selection test?

I have performed a codon based-Z test (MEGA) on a protein coding gene alignment from 30 species to compare the dN-dS values used as a measure of selective pressure indicating neutral mutation...

07 August 2017 1,982 2 View

How do I build a phylogeny with missing data and incomplete taxon coverage?

What are the most state-of-the-art methods to build a phylogeny with missing data? I have a 12 genes and 50 species, but some genes are missing for some taxa. There are genes were have only little...

10 November 2015 6,706 7 View

Looking for a bioinformatician for collaborative work to develop a simple software: can anyone help?

I'm looking for a collaborator (expertise in bioinformatics) to develop a simple software. The goal is to develop a downloadable platform independent calculator in Java or similar. The work is...

04 May 2015 1,054 0 View

What is the easiest way to create XML format files with the sequences and the tree in the same file?

I want to run an analysis and have to use XML-based file format which I have never done before. The guide tree and the sequences have to be in the same file. Does anybody know a program which can...

01 February 2015 7,756 5 View

What are the general perspectives of weed genomics?

I'm preparing some text about weed genomics and I want to emphasize the general biological importance of it rather than the importance of development of specific tools to study a plant group. What...

08 September 2014 1,022 5 View

How much would it cost to sequence a genome?

Can someone tell a price estimate (EUR) how much it would cost to sequence a plant genome with an approx size of 1200 Mbp? Platforms: illumina/PacBio/454.

08 September 2014 2,654 9 View

Massive parallel sequencing of the plastome of economically important plant species and wild relatives?

I would like to collect some pros and cons for a review/opinion paper and waiting for some comments on why it would be useful to have complete chloroplast genomes sequenced for some economically...

07 August 2013 3,658 2 View

Where can I publish a short note on the occurrence of an invasive plant species or neophyte in a country where it was not recorded before?

One colleague found an invasive plant species not recorded previously in Iran and is asking where to submit a short note. I know that for example in phytopathology there are quite a few options to...

06 July 2013 6,954 10 View

Can I base on reverse DNA sequences to perform alignment, convert to amino acids and GenBank submission?

I have reverse sequences (AB1 format), can I base on reverse DNA sequences to perform nucleotide alignment, convert nucleotides to amino acids and deposit the sequence in GenBank database?

11 August 2024 5,138 1 View

Which Scopus Journal provides the most affordable fees?

"PUBLISHING IN A SCOPUS JOURNAL" Researchers are now at a cross road. The critical need to publish in a Scopus or ISI, etc journal is ever vital. Journal Publication fees must be submitted....

10 August 2024 8,621 1 View

Seeking Advice on Viability and Execution of Undergraduate Thesis Topic?

Hello everyone, I am currently developing a thesis proposal and would appreciate your input on its viability and how to effectively carry it out. My proposed topic is: "Does the perceived threat...

10 August 2024 8,992 0 View

Who will be moral responsible for the death of thousands of people in the event of an earthquake?

Who will bear moral responsibility for the deaths of thousands of people in the event of an earthquake? Weeks and months remain before the onset of strong earthquakes that bring death to...

08 August 2024 6,134 12 View

Self-Organizing Superorganisms—as envisaged by Nenad Sestan (2018)?

The rate of glucose consumption by the neocortex is reduced by over 80% during anesthesia (Sibson et al. 1998), which disables the synapses (Richards 2002) that are inundated by glial tissue (Engl...

08 August 2024 3,118 0 View

The Bigger You Are, the Harder You Fall (some lessons from Dinosaurs)?

Evolutionary fitness is based on an organism’s ability to adapt rapidly to changing environmental circumstances. Large-bodied mammals have been equipped with large brains (and hence a high...

06 August 2024 4,849 2 View

Are there any instruments for studying time similar to the way it is in space?

There are a huge number of methods for studying objects in space, according to the senses (and not only). Mechanical, thermal, optical, acoustic, electrical, magnetic, based on particle beams,...

06 August 2024 7,102 0 View

How do soil microflora interact with plant roots and influence plant nutrition, health, and productivity?

06 August 2024 9,618 3 View

Are there instances where molecules with larger molecular weights exhibit greater mobility than those with smaller molecular weights?

Hi, I know that low molecular weight (MW) molecules generally tend to have higher mobility, while high molecular weight molecules tend to have lower mobility. However, in my experimental...

06 August 2024 1,495 2 View

Weak DAPI staining after immunohistochemistry - how to improve?

After immunohistochemistry of previously fixed in PFA and EtOH and then frozen 20 μm sections of zebrafish brain, DAPI staining is very weak (right) compared to the same sections stained without...

05 August 2024 9,637 2 View