mcmc ngen=3000000 append=yes
Setting number of generations to 3000000
Setting append to yes
Running Markov chain
MCMC stamp = 0369747344
Seed = 1623279333
Swapseed = 1700407362
Model settings:
Data not partitioned --
Datatype = DNA
Nucmodel = 4by4
Nst = 1
Covarion = No
# States = 4
State frequencies have a Dirichlet prior
(1.00,1.00,1.00,1.00)
Rates = Equal
Active parameters:
Parameters
---------------------
Statefreq 1
Ratemultiplier 2
Topology 3
Brlens 4
---------------------
1 -- Parameter = Pi
Type = Stationary state frequencies
Prior = Dirichlet
2 -- Parameter = Ratemultiplier
Type = Partition-specific rate multiplier
Prior = Fixed(1.0)
3 -- Parameter = Tau
Type = Topology
Prior = All topologies equally probable a priori
Subparam. = V
4 -- Parameter = V
Type = Branch lengths
Prior = Unconstrained:GammaDir(1.0,0.1000,1.0,1.0)
The MCMC sampler will use the following moves:
With prob. Chain will use move
0.98 % Dirichlet(Pi)
0.98 % Slider(Pi)
9.80 % ExtSPR(Tau,V)
9.80 % ExtTBR(Tau,V)
9.80 % NNI(Tau,V)
9.80 % ParsSPR(Tau,V)
39.22 % Multiplier(V)
13.73 % Nodeslider(V)
5.88 % TLMultiplier(V)
Division 1 has 2488 unique site patterns
Initializing conditional likelihoods
Using standard non-SSE likelihood calculator for division 1 (single-precision)
Getting values from previous run
Executing file "C:\Users\Janus\Downloads\MrBayes-3.2.7-WIN\MrBayes-3.2.7-WIN\bin\Brand\AAAAAAAAA\Filtro5%.nexus.ckp"
DOS line termination
Longest line length = 2133
Parsing file
Expecting NEXUS formatted file
Reading trees block
Successfully read tree 'mcmc.tree_1'
Successfully read tree 'mcmc.tree_2'
Successfully read tree 'mcmc.tree_3'
Successfully read tree 'mcmc.tree_4'
Successfully read tree 'mcmc.tree_5'
Successfully read tree 'mcmc.tree_6'
Successfully read tree 'mcmc.tree_7'
Successfully read tree 'mcmc.tree_8'
Exiting trees block
Reading mrbayes block
Could not find parameter 'tratio': ignoring values
Could not find parameter 'tratio': ignoring values
Could not find parameter 'tratio': ignoring values
Could not find parameter 'tratio': ignoring values
Could not find parameter 'tratio': ignoring values
Could not find parameter 'tratio': ignoring values
Could not find parameter 'tratio': ignoring values
Could not find parameter 'tratio': ignoring values
Successfully set starting values
Could not find move 'dirichlet(tratio)'
The error occurred when reading char. 20-20 on line 96
in the file 'C:\Users\Janus\Downloads\MrBayes-3.2.7-WIN\MrBayes-3.2.7-WIN\bin\Brand\AAAAAAAAA\Filtro5%.nexus.ck '
Returning execution to command line ...
Error in command "Mcmc"