How to perform an automated image analysis of skeleton length in ImageJ?

More André Dantas de Medeiros's questions See All

RNA later for the preservation of RNA in fecal samples at room temperature for one day (37°C)?

I am planning to collect human fecal samples for metatranscriptomic analysis using MGI. These samples are from indigenous people living in a region with high temperatures. I will have access to a...

06 August 2024 1,367 3 View

How to develop an academic literacy program for engineering at the higher education level?

Information literacy in higher education integration with curricula engineering

04 August 2024 5,368 3 View

How can i generate a CRISPR knockin mutation zebrafish model with a reporter?

Hey! I aim to generate a transgenic knockin zebrafish line that mimetizes a genetic condtition that leads to a certain disease on human. To do so, I need to insert a codon for mutagenic aminoacid...

14 July 2024 6,240 0 View

What should be the best Lumens range for T8 (120cm) full spectrum LED lamp tubes?

Please (for Arabidopsis), what could be a good Lumens and color range (Kelvin) range for full spectrum LED lamp tubes size T8 (120cm) for each shelve measuring 130x50 cm (length x width) and 60 cm...

11 July 2024 6,078 1 View

Cross Attention in Transformers: Standard applications of the same ?

What are the standard applications of Cross Attention in Transformer Architectures ?

09 July 2024 9,310 2 View

Time Series Analysis: Has Recurrent Neural Networks (RNN) ever been used on Time Series Analysis ?

Are there standard RNN architectures been applied for Time Series Analysis, forecasting and anomaly detection problems ?

30 June 2024 3,169 8 View

LSTM on Time Series: Has LSTM architectures ever been applied to Time-Series Forecasting ?

Have we ever used LSTM architectures on Time-Series Forecasting and Analysis, and gotten a decent result ?

30 June 2024 6,924 3 View

What could be causing these smears in my PCR electrophoresis gel?

I am new to running PCR gels. I loaded this gel and I thought it was fine, meaning I saw/felt no apparent punctures or spillovers to neighboring wells (see picture 1). When the gel started to run,...

30 June 2024 4,107 4 View

How can upload an article research gate ?

I want to upload my articles drafts

29 June 2024 2,016 3 View

What are the typical applications of Large Vision Models (LVMs) ?

Where are large vision models typically used ?

25 June 2024 4,113 0 View

Weak DAPI staining after immunohistochemistry - how to improve?

After immunohistochemistry of previously fixed in PFA and EtOH and then frozen 20 μm sections of zebrafish brain, DAPI staining is very weak (right) compared to the same sections stained without...

05 August 2024 9,637 2 View

Dirty and clean?

Hi everyone I need a file with a dirty and clean potato image

04 August 2024 7,199 4 View

Hello, regarding Mxene 2D titanium carbide?

I fabricated Ti3C2Tx using concentrated HF 40%, I plot an XRD as attached image below.. please let to know if I obtained it or not.

02 August 2024 6,789 4 View

IHC profiler in image j software. has anyone used it to quantify nuclear DAB positivity?

Dear researchers. I tried using the IHC PROFILER in image j to quantify nuclear DAB staining. I followed the instructions in the original article by "Varghese F, Bukhari AB, Malhotra R, De A...

29 July 2024 2,229 0 View

While using the IHC PROFILER plugin in image j software, to quantify the epithelial cytoplasmic DAB staining do you crop remove the stromal tissue?

My question pertaining to the DAB staining in cytoplasm of human oral squamous cell carcinoma tissue. When quantifying the epithelial cancer cells do we have to crop remove the stromal tissue?...

29 July 2024 2,682 6 View

Why in 2D image created by discovery studio 2021, the halogens appear as alkyl group?

In my molecule there is Chloro group at 2-position of phenyl ring, but in 2D image it appears as methyl showing no interaction.

28 July 2024 734 0 View

How can I better use imageJ to get good result on calculating surface area of a film accurately?

I have images of film formed on the bottom of a 50mL beaker, and I have been trying to figure out the surface area. I could easily use features on imageJ to do that, but I want to know which area...

23 July 2024 4,461 1 View

Why is there a significant edge deviation in radar point cloud and camera registration?

The above are manually labeled extrinsic matrices based on the first image It can be seen that the projection error at the edge is large, while the error at the center is small. What could be the...

23 July 2024 7,479 3 View

How to quantify the fluorescence intensity of only the merge area of an image using ImageJ software?

Dear All: I have to quantify the fluorescence intensity of cells that are fluorescent to two different markers, so i'm interested in finding out if this is possible. Previously I have...

22 July 2024 8,770 1 View

About Machine Learning for Automated Diagnosis of Skin Cancer with Dermoscopy Images ?

Machine Learning for Automated Diagnosis of Skin Cancer with Dermoscopy Images

21 July 2024 5,471 0 View

Matheus Cardim Ferreira Lima

Dear André, If you try with python, you can use the regionprops algorithm. I am not sure about ImageJ, but I think it is more limited. All the best

André Dantas de Medeiros

Dear Matheus Cardim Ferreira Lima , I appreciate your valuable suggestion. Warmest Regards

In the meantime, I found an alternative via ImageJ, called BoneJ plugin (http://bonej.org/).

Chetna Kaushal

Features could be calculated From regionprops command in matlab