Hi Mirza, you can isolated DNA using phenol-chloroform extraction or TRIZOL than do PCR amplication ITS2 region by specific PCR primers. This journal may help you : http://www.mosquitocatalog.org/files/pdfs/WR382.pdf and http://www.teses.usp.br/teses/disponiveis/42/42135/tde-30032001-141738/publico/Artigo1a.pdf.
Thank you so much Kris for your advise and journal, Actually I used the Genetic Finger Print Method's Before but it's not good. Are you ever been do that before?