Hello everyone, I am first year PhD student, and I should work with Qupath for part of my project ( for cell detection and quantifying), I watched many tutorial videos, I asked from AI, I sent an email to people who used this software in their paper, but I can not find the answer.

How should I know the adjustment for a tissue that I have?

I am working on endometriosis, I have endometrium tissue, for practice I should just do the quantifying for normal H&E stained endometrium cells, then I should do the detection for Ki67, CD3, CD45,CD8 and... . how should I know the best adjustment for each one?

Is there anybody here that can help me?

Thank you in advance

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