For studying DNA Methylation, how many primers sets are required for MSP (methylation specific PCR)? there are many CpG sites at the promoter sequence but not getting how to design a primer for the same! Kindly explain if anyone can.
Hi, has several programs that can help you.
And you can read this paper: Article Methylation-specific PCR: Four steps in primer design
- http://www.urogene.org/methprimer/
- http://bisearch.enzim.hu/
I hope I was helpfull
I found one more link, which explains better
https://www.biocompare.com/Bench-Tips/134020-Finessing-the-Design-of-Methylation-Specific-PCR-Primers/
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