After coupling covalently your beads to the antibody of interest, and resuspending the beads at a concentration of 5mg per 165ul (as suggested in the protocol), how much mg/volume of beads do you effectively use for IP experiments?
In terms of Ab coupling to the Dynabeads M-270 Epoxy coupling of large amounts of Abs (20-30microG Ab/mg beads) is not recommended. If loading 20µg of Abs to the beads, the total amount of Abs covalently coupled to the beads will not be more than 13µg/mg beads. Up to 10µg one will find a linear relationship between added Ab and coupled Ab. Above these concentrations the Abs will precipitate down to the bead surface but a reduction in covalent bonds is seen. Actually, less than 10 µg ensures efficient covalent binding (no leakage) and functionality.
Feel free to contact me at [email protected] for discussion as I am working as a staff scientist in R&D at the production facility for the Dynabeads in Oslo, Norway.
In terms of Ab coupling to the Dynabeads M-270 Epoxy coupling of large amounts of Abs (20-30microG Ab/mg beads) is not recommended. If loading 20µg of Abs to the beads, the total amount of Abs covalently coupled to the beads will not be more than 13µg/mg beads. Up to 10µg one will find a linear relationship between added Ab and coupled Ab. Above these concentrations the Abs will precipitate down to the bead surface but a reduction in covalent bonds is seen. Actually, less than 10 µg ensures efficient covalent binding (no leakage) and functionality.
see ref Alber et al., (2007) Determining the architectures of macromolecular assemblies Nature 450, 683-694 and Oeffinger et al. Nat Methods. 2007 Nov;4(11):951-6. Epub 2007 Oct 7 for very nice co-IP work.