How CytoF data can be analyzed using Phenograph algorithm in Cytofkit?

24 April 2022 1 946 Report

Hi good people,

I am trying to analyze cytoF data with the phonograph algorithm of Cytokit. I faced a lot of issues running the code in R. Is there anyone who has performed the same analysis? I would like to know which version of R and Bioconductor did you use.

Thank You,

Sadi

Alessandro Palma

You should be able to use cytofkit shinyapp without running any R code: just open R, and type library(cytofkit) and then cytofkitShinyAPP()

However, cytofkit runs on older versions of R (if I remember well, only R 3.6 or older versions).

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