I have microarray data from Affymetrix Clariom S Assay, Human chips, I read the .cel files but when I do the RMA normalization I get the following error:
" Error in getCdfInfo(object) :
Could not obtain CDF environment, problems encountered:
Specified environment does not contain Clariom_S_Human
Library - package clariomshumancdf not installed
Bioconductor - clariomshumancdf not available"
I also tried oligo package did not work, and the featureData from the GEO set doesn't have gene names.
Is there a package to annotate this type of affymetrix data?