Can you be more specific about the composition of the gel, the % crosslinker - content of the acrylamide solution, and in particular, which buffering system you are using?
Conventional Tris-glycine gels, even 15-20% will only resolve down to around 10kDa ; everything below this will not be separated - hence the smearing you noted.
Can you be more specific about the composition of the gel, the % crosslinker - content of the acrylamide solution, and in particular, which buffering system you are using?
Conventional Tris-glycine gels, even 15-20% will only resolve down to around 10kDa ; everything below this will not be separated - hence the smearing you noted.