How can I statistically analyse numbers/types of ancestral character states in R?

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Neil Brocklehurst

The R package "ape" has a function called "ace" that can use likelihood to calculate the probabilities of discrete character states at nodes in a tree, and can also calculate ancestral estimates of continuous characters.

David Fawdon

Thanks, in that case I all ready have them. I am just blind/ very new to R.

Thanks for pointing out the obvious.