Hi Kavitha! Whats your objective of the project? Are you intending to do Molecular Modelling or Structure Prediction studies? Can you tell me in brief?

can anybody tell me, how i should proceed correspondance analysis method for codon bias studies.

hi venkatesh...

k ....the 1st main objective is structure prediction fro that protein....so how can i proceed in that?

Hi Kavitha raj,

What is the protein name, Do you have PDB number of it.

As I understood your Question, your looking to predict the structure for some unknown sequence of protein.I am not aware to complete your Question.

If you want to study the homology of protein sequence or prediction of its structure, here is a wonderful tool , a work space for prediction.

You hust give the sequence and leave it for automatic generation, after you may able to get all the predictions with error comments and error score.

http://swissmodel.expasy.org/

write me if doesnot resolve your question...

@srikanth aluru thanks. And i do have some more doubts in that..sure i will get back to u.