Genome NA12878 from CEPH/UTA Pedegree?

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Frederic Lepretre

hi Sara

there are some data on GSM3133366 in the GEO database (the internal id for NA12878) but it concerns only copy number and methylation state.

variants can be found at UCSC but you'll need to dig....

https://genome.ucsc.edu/cgi-bin/hgSearch?search=NA12878&db=hg38

all the best

fred

you'll find the vcd file for this sample as this example

Sara Fernández-Castillejo

Thank yoU! I have problems downloadind the data and translating to xls format, so I would be interested in having the final excel with all the variants included.