Estimation of confidence intervals in Nei's gene diversity?

More Vassilis Papasotiropoulos's questions See All

Does anyone know anything about inconsistent modulus in Micro-checker? Is this affecting the calculations for null alleles detection?

Microchecker is running with my data but I am getting a message that values with incostint modulus are existing in my data

05 June 2018 9,494 1 View

error in running a model in Abaqus

Excessive rotation of nodes in node set ErrNodeExcessRotation-Step1

17 August 2021 0 0 View

error in modelling model in Abaqus

Excessive rotation of nodes in node set ErrNodeExcessRotation-Step1

17 August 2021 0 0 View

MD MOE RMSD

How to calculate the RMSD values for a MD simulation using MOE?

07 August 2021 0 0 View

MD MOE RMSD

How to calculate the RMSD values for a MD simulation using MOE?

07 August 2021 0 0 View

MGL tools

20 June 2021 0 0 View

fatal error

When I tried to energy minimization my system, I got fatal error as below. Fatal error: Atomtype opls_116 not found Although I've already added this line: ; include water #include "oplsaa.ff/spc.itp" to [molecultype] directive in my topology.

16 June 2021 0 0 View

fatal error

16 June 2021 0 0 View

fatal error

16 June 2021 0 0 View

fatal error

16 June 2021 0 0 View

i have some problem with chtMultiRegionSimpleFoam

--> FOAM FATAL ERROR: Maximum number of iterations exceeded From function Foam::scalar Foam::species::thermo::T(Foam::scalar, Foam::scalar, Foam::scalar, Foam::scalar (Foam::species::thermo::*)(Foam::scalar, Foam::scalar) const, Foam::scalar (Foam::species::thermo::*)(Foam::scalar, Foam::scalar) const, Foam::scalar (Foam::species::thermo::*)(Foam::scalar) const) const [with Thermo = Foam::hConstThermo >; Type = Foam::sensibleEnthalpy; Foam::scalar = double; Foam::species::thermo = Foam::species::thermo >, Foam::sensibleEnthalpy>] in file /home/ubuntu/OpenFOAM/OpenFOAM-4.1/src/thermophysicalModels/specie/lnInclude/thermoI.H at line 66. FOAM aborting #0 Foam::error::printStack(Foam::Ostream&) at ??:? #1 Foam::error::abort() at ??:? #2 Foam::heRhoThermo >, Foam::sensibleEnthalpy> > > >::calculate() at ??:? #3 Foam::heRhoThermo >, Foam::sensibleEnthalpy> > > >::correct() at ??:? #4 ? at ??:? #5 __libc_start_main in "/lib/x86_64-linux-gnu/libc.so.6" #6 ? at ??:?

24 March 2021 0 0 View

Christian Parisod

Have a look at AFLPsurv by X. Vekemans...

http://www.ulb.ac.be/sciences/lagev/aflp-surv.html

B.A. Padder

There are many softwares wich can calculate Nei,s genetic ditance and to estimate confidence of binary data like 0,1. Try these softwares which are free ARlequin, Genalex, Pop Gene, Multilocus and many more. But you sholud be able to make input file. A software is there CONVERT which uses Excel as input file (Text Tab Delimited) and then convert the data in to many softwares. Good luck and try these

Vladan Ivetic

I'm using TFPGA. It is simple to use but provide many options. It is free. You can find it at http://www.marksgeneticsoftware.net/tfpga.htm. If not, I believe that I still have installation file.