In my PhD, I am trying to evaluate the role of macrophages in breast cancer, my supervisor suggested to use macrophages differentiated from Thp1 with PMA, instead of using primary macrophages. Unfortunately these macrophages did not give anything similar to primary macrophages in term of gene expression, I actually got completely different result in comparison with primary ones. Did anybody use them before ? I am a bit scared of carrying on with Thp-1 differentiation to macrophages as they do not have the same characteristic as primary ones.