Does anyone have ideas about TMAP algorithm?

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Alex Zotov

Hi Sourav!

I found a GitHub where they have TMAP algorithm for ion torrent. Let me know if it helps you.

https://github.com/iontorrent/TMAP

Here is another link where they explain how it works and you can purchase an app to use it:

https://igor.sbgenomics.com/apps/#ion.tmap

Here is another Dr. Nils Homer who uses TMAP algorithm a lot in his work.

https://github.com/nh13

I also read that people have had good results using MIRA: http://www.chevreux.org/projects_mira.html

I hope this info helps Let us know if you need any other help? [email protected]

Sourav Nayak

Thanks a lot Alex.

Yes, the information and links you have provided are pretty useful for me. After getting started, if I face some problem, I will get back to you. Thanks again.