Does anyone have any experience in ITK-SNAP for muscle DTI analysis and fiber tracking?

More Ezgi Kirimli's questions See All

I want to create Amphiphilic Polysaccharide and PLA MPs by electrospray technique (single axial). Could you suggest suitable solvent ?

I know that PLA is soluble in DCM, not soluble in water and hard to dissolve in DMF. What kind of solvents will be suitable for electrospray system for the amphiphilic polysaccharide and...

13 October 2020 3,559 4 View

Does anybody look Erasmus K2 Projects Partnership?

Hello All, We are currently looking for Erasmus K2 Project partner in Europeen countries. Are there anyone interested in becoming a project partner in the social sciences and (or technical...

10 December 2019 6,491 2 View

Ethanol contamination during elution of cDNA with TE in RNA-seq library prep?

I am using NEBNext Ultra II RNA library prep kit for preparing libraries from bacterial samples. When the libraries ready, I did second Ampure bead purification for those have dimer peaks. During...

24 October 2018 8,971 2 View

Multi step ahead time series forecasting in SVR?

Hi, I am trying to do multi step ahead time series forecasting by using SVR. When I do forecast for training dataset, the results are pretty good. However, when I do iterative forecasting by...

24 July 2018 4,713 3 View

Which way is better for batch anaerobic reactor? Continuous nitrogen sparging or one time sparging?

I am trying to grow Bifidobacterium longum in a anaerobic reactor. I use MRS+ L-cysteine for the growth media (which is also regular growth media). I maintain anaerobic conditions with N2...

07 March 2018 9,449 7 View

How can i separate mouse embryo bone from tissue for RNA isolation, is there any easy solution instead of cutting the tissue?

I am trying to isolate RNA from bone to analyse gene expression levels in mouse embryo.

15 January 2018 3,918 2 View

Protein isolation and western blot from FFPE tissues?

we tried to isolate and western blot proteins from Formalin fixed paraffin embeded tissues. We did this protocol: 1. we got 5 x 10 micro meter paraffin sections. 2. xylene, 96-90-80-70 alchols,...

23 August 2017 9,064 3 View

I am using NEB 10-beta competent E.coli cells. Transformation is successful but colonies dont grow in LB. Do you have any advise?

I am using NEB PCR cloning Kit. There is pMiniT vector inside kit. I transformed ligation bwt my PCR product and pMiniT vector to NEB 10-beta competent E.coli cells. I used SOC growth medium for...

21 February 2016 2,608 7 View

Glass fiber content in a gypsum board ?

Any idea on how to get the volumic ratio of glass fiber in a gypsum board ? Thank you for your help !

01 March 2021 2,501 3 View

How can we limit artifacts caused by rotation in fiber photometry?

We are trying to run fiber photometry experiments for long time scales, but we get these sinusoidal artifacts that come up. We think they may be caused by twisting of the fiber optic subject...

25 February 2021 568 1 View

Steps to calculate activation energy by coats & redfern method?

I'm a chemistry student and I'm researching the kinetic degradation of mixed plastic waste. I'm having trouble calculating the activation energy by the coats & Redfern method. The data that...

24 February 2021 974 1 View

How to properly calculate Interfacial area density in a porous domain?which are possible value for glass fiber?

I'm doing a cfx simulation of a multiphase flow in pultrusion and i set the Interfacial Area density in the heat exchange of a porous medium in this way IAD=Total fiber lateral surface of fiber...

23 February 2021 6,043 1 View

Are there any open-source datasets containing physiological information about exercises to be used for an OR-model?

I have just recently started a new "weekend project" in addition to my master's studies and I am looking for a data-set. I would like to use some Operations Research to design an optimal gym...

22 February 2021 8,023 1 View

How can we add reinforced thermoplastics with granules in injection molding machine?

I need to make an injection molding machine in which short fibers are to be introduced. Short fiber length and material properties are to be determined and also the material strength are to be...

22 February 2021 4,290 1 View

Staining methods for skeletal muscle fiber typing?

does anyone know the best method to differentiate and quantify rapid fatiguing and fatigue resistant muscle fibers? the old method form the 1980's uses ATP staining which is quite labor intense?

21 February 2021 6,483 3 View

Why the storage moduli E' decrease with highr fiber volume?

Hi guys, I am facing problems to interpret a DMA results. Material: Composite Bisphenol A + curaua fiber What is being tested: the influence of fiber volume on the composites properties...

12 February 2021 174 7 View

Why is there cloudy white solution in flavonoid test tube?

I do flavonoid test for biscuit incorporated with muntingia fruit powder. Sample extracted with metanol (1:10 ,w/v), macerated 24h, sentrifuged and filtered. Supernatan used for analysis. I have...

08 February 2021 6,779 4 View

What is the reason of the received optical signal to be slimmed down in multi-mode fiber?

What is the reason of the received optical signal to be slimmed down in multi-mode fiber? I have 4 km multi-mode fiber

03 February 2021 1,105 10 View