I am currently working with PacBio SMRT sequencing data acquired from various sequencer platforms, including Sequel I, Sequel II, and PacBio RS II. These platforms generate both Circular Consensus Sequencing (CCS)/HiFi and Continuous Long Reads (CLR).

Regrettably, some datasets lack information regarding whether the reads are CCS or CLR. Consequently, I am in search of an adapter trimming tool that accommodates both CCS/HiFi and CLR reads for PacBio SMRT data.