We're trying to develop a more humane protocol for perfusion in laboratory mice. We had mice waking up during perfusion from anesthesia with avertin, but not with pentobarbital anesthesia using buprenorphine (for pain control) as a pre-med. Currently there is a shortage/backorder of pentobarbital so we are seeking alternative. We are considering a combination of ketamine and xylazine for anesthesia with buprenorphine + Acepromazine OR Midazolam pre-med.
We like this option because of its welfare benefits: 1) it can be given sub-Q, avoiding painful/uncomfortable IP, and 2) it provides excellent pain control.
But we are also concerned about potential effects of the drug combination (especially ketamine) on our outcome measures - primarily markers of neuronal activity and plasticity (e.g. IEGs, dendritic spine density, BDNF etc. though we are not sure precisely which assays we will be running yet).
Is the use of ketamine as an anesthetic before brain collection accepted in broader neuroscientific community? Or specifically behavioural neuroscientists working with laboratory rodents? Or is it a hard no-go for various reasons (e.g. having affinity for many membrane-bound proteins potentially causing many unknown alterations in the post-mortem brain)?Are there dose dependent effects of ketamine (+/- xylazine) on readouts? For instance, we could reduce the dose of ketamine/xylazine by adding acepromazine to the induction protocol (leave ace out of the pre-med, and use ket/xyl/ace combo SQ to induce anesthesia), if a smaller dose of ket/xyl = less likely to impact outcomes.Do you have any other recommendations for anesthetics that can be administered sub-Q or IM (avoiding IP for welfare considerations)?Are there studies on rodents using ketamine + xylazine prior to perfusion and examining markers of neuronal activity and plasticity (please provide reference)? And/or are you (the reader) currently using this drug combination with mice or rats to do neuroscience? Or know anyone who is?Are there any studies examining the post-mortem effects of ketamine + xylazine on a variety of neuroscientific assays versus other anesthetic agents (please provide reference)? Thank you all very much for your help!