What is the typical number of reads from a illumina MiSeq 16S microbial community profile from an environmental sample?
I ran 10 samples altogether, yielding a total of 10,289,176 reads before quality filtering. After removal of chimeras and denoising (up to OTU assignment), the total was 4,560,861. I then quality...
02 March 2014
5,208
10
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