Can anyone explain me the russell linding score?

More Vrushali Kashinath Chimankar's questions See All

Can we measure tumour volume or area from H&E stained slides?

I have H&E stained slides of lungs from mouse models of lung cancer. I was wondering if I can calculate tumour volume or area from the H&E stained slides. Thank you. Vrushali

08 September 2017 1,148 1 View

What are the parameters for selecting a transcription factor bound to promoter region when using PROMO:Alggen?

I am interested in finding transcription factors binding to promoter of a virus, Merkel cell polyomavirus. I got several factors with varying dissimilarity. Is there any criteria that can be used...

04 May 2016 770 2 View

How do I find promoter sequence of a viral genome ?

I want to align promoter sequence of a small T antigen and large T antigen of virus (merkel cell polyomavirus). I am aware that for human genome we generally subtract and add 1 kb from genome to...

09 October 2015 8,165 1 View

How to choose a journal to publish your paper?

I have some data from my MSc dissertation which I am thinking of publishing but I am not sure how to publish a paper eg how to choose a journal, impact factor etc. Can anyone provide...

01 February 2015 590 6 View

How much of Bioinformatics knowledge do I need to elucidate the functional effect of missense mutation?

I am a postgraduate student and have completed MSc in Medical genetics. I intend to apply for PhD in future and my current interest lies in analysing missense mutations for their pathogenecity. I...

31 December 2014 7,242 3 View

Does anyone have experience in generating workflow in CLC Genomics Workbench 7.5?

Hello everyone, I am supposed to use CLC Genomics workbench to perform trio analysis to find candidate gene responsible for rare disorder. Can anyone help me in generating Workflow in CLC Genomics?

09 October 2014 8,199 2 View

How can one perform trio analysis using CLC genomics workbench 7.5?

I have a exome sequencing data of parents and their child. We are trying to identify the candidate genes responsible for some abnormality.I have never used CLC genomics workbench. Do I need a...

09 October 2014 3,424 4 View

Computing h bonds in swiss pdb viewer?

I wanted to see the h bond interaction within a protein so I used swiss pdb viewer. Generally it gives only green dotted line as h bonds, but it also gave purple colored dotted line. Can anyone...

07 August 2014 1,844 1 View

Is there any criteria to choose a chaperon to crystallize a intrinsically disordered region in a protein?

I read an article where an intrinsically flexible protein was crystallized using chaperon (here chaperon is a protein that helps to stabilize other protein) . i was wondering what would be the...

07 August 2014 7,635 5 View

For using Align GVGD we have to paste MSAs, so how does one choose the number of sequences that share a similarity between the gene of interest?

I am trying to analyse APC gene. I used blast to get multiple sequence alignment. How many sequences should I choose to input in Align GVGD. Is there any criteria?

06 July 2014 6,127 1 View

How to learn more about SPSS and its Application?

I would like to learn more about SPSS and Its application especially in regards to data analysis. Please suggest me how I can learn more about it. Thank you so much.

11 August 2024 9,101 4 View

Can I base on reverse DNA sequences to perform alignment, convert to amino acids and GenBank submission?

I have reverse sequences (AB1 format), can I base on reverse DNA sequences to perform nucleotide alignment, convert nucleotides to amino acids and deposit the sequence in GenBank database?

11 August 2024 5,138 1 View

Baseline drift in HPLC? What causes this?

Hello, Why do i see this baseline drift when i compare my blank (black) to the sample (blue)? Any suggestions as to why this happened? Thank you!

11 August 2024 3,770 4 View

Text-Communication from the M1 Hand Area using BCI—and then there is Elon Musk?

Willett, Shenoy et al. (2021) have developed a brain computer interface (BCI) that used neural signal collected from the hand area of the motor cortex (area M1) of a paralyzed patient. The...

10 August 2024 7,180 0 View

Has anyone applied Python in the field of textile engineering for data analysis, automation, or smart textiles?

I'm currently exploring the application of Python in textile engineering, specifically in areas like data analysis, process automation, and the development of smart textiles. I'm interested in...

10 August 2024 7,429 2 View

How can I use the cif data obtained from rietveld refinement extracted via gsas2, for microstructural analysis using ETEX software?

09 August 2024 7,718 0 View

GC-MS retention index prediticon?

Hello experts, Does anyone know any free software about retention index prediction ?

08 August 2024 7,403 2 View

How are iso-frequency contours plotted?

Let's say we have a standard, regular hexagonal honeycomb with a 3-arm primitive unit cell (something like the figure attached; the figure is only representative and not drawn to scale). The...

07 August 2024 1,937 1 View

How to prepare the nanoparticle treated fungal sample for Environmental SEM analysis?

A fungal strain was treated with nanoparticles. We want to do an environmental SEM analysis. So could anyone share your views on preparing the sample? Thank you.

07 August 2024 5,307 1 View

How to normalize and take the significance of the MTT OD values with 3 replicates for the same cell-line?

Hi, I have a question about normalizing the MTT OD values for doing the statistical analysis. So, if we have 3 different plates and we call them 3 different replicates, so, first we would...

07 August 2024 8,106 4 View