thnx for reply Mr. Jochen Wilhelm . But in that array only n=1 is there..Can I use same type of sample data from another array data with same platform and consider them n=2 or 3?
ok sir..actually I am completely a new person to analyse microarray . Can you please suggest me a suitable method for meta- analysis. Shall I take CEL files from all interest arrays and then normalize them with RMA or gcRMA ? or first I shall normalize them independently and then club them together to find differentially expressed genes ? and how to see that differences in two different arrays are correlated or not?