Can anybody give any suggestions on mapping degradative pathway genes in whole genome contigs of bacteria?

More Saheli Ghosh's questions See All

How Relativistic effects is one reason for lanthanide contraction?

The Lanthanide contraction which is the decrease in ionic radii of the elements in the lanthanide series from atomic number 57, lanthanum, to 71, lutetium, is due to poor shielding of the 4f...

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What is the best way to calculate sample size for a multivariate regression model for adequate power?

GPower is only equipped to deal with calculations of bivariate regressions and needs SD s for both predictor samples. However, if one has a multiple regression with more than 2 outcome variables...

12 February 2021 6,911 3 View

How Marcus free energy, reorganization energy is related to thermal effect for electron transfer state?

The molecules separation medium is associated to medium permittivity of Frenkel effect and naturally diverse environmental temperature may influence the electron transfer process in organic...

02 February 2021 5,168 3 View

Alpha synuclein lack structurw (i.e some of the helix part goes into turn ), any cause behind this?

I am trying to simulate alpha synuclein (1xq8.pdb) in GROMACS using GROMOS53a6 ff. I have run it for 200 ns. At the end of simulation alpha helix protein losses its helical structure. I am not...

31 January 2021 4,285 3 View

In which laboratory of India 13C NMRanalysis of solid samples could be performed?

I need to analyse some solid samples (soils) for 13C NMR. Is there anyone who can help me out? The contribution of the contributor would be properly credited during any sorts of publication....

07 January 2021 2,016 4 View

Why the presence of surface active compound repress the mass spectra of other compound? If the sample is itself surface active, then self repression?

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07 January 2021 987 5 View

What are the mental health insurance policies in different countries?

Post Covid 19 the scenario in India has changed and some of the private insurance companies are providing coverages for mental disorders. So My question is what mental disorders are covered in...

04 January 2021 6,474 10 View

In a microgel-DTPA suspension (in water), what can be added as a counter to TMEDA to adjust its pH to 6?

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04 January 2021 6,743 1 View

Does posting articles to Research gate gives any edge or credit to a student in Phd application?

07 December 2020 4,001 3 View

Where to get free cancer patient demographic data?

Is there any freely available global repository to get cancer patients' demographic data? #cancer #cancer_research

06 December 2020 5,469 2 View

How to compare two groups with only two measurements?

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03 March 2021 8,796 3 View

Enhanced Yellow Fluorescent Protein (Aequorea victoria) DNA sequence?

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03 March 2021 3,568 1 View

What kind of fluid could I use for a pitfall trap that also does not invalidate molecular testing?

Hi, I want to start testing pitfall trap to obtain ants samples, but I need to conduct molecular analysis on those insects. So, what kind of fluid can I use? Ethanol expires too early and I need...

03 March 2021 5,978 5 View

What's the best way to measure growth rates in House sparrow chicks from day 2 to day 10?

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Do we need to write protocol for a second study of a systematic review that has been registered and published?

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03 March 2021 8,920 3 View

How to increase a model accuracy ?

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03 March 2021 6,994 5 View

Do I need to do linear regression before running mediation analysis using PROCESS MACRO by Hayes ?

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02 March 2021 4,359 3 View

Sample dilution for quantitative analysis using ELISA?

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02 March 2021 7,670 3 View

Is There Any Feasible Method To Test Fluorescent Compounds Other Than Fluorescence Spectrometers ??

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02 March 2021 5,785 3 View

How to calculate average trend in maximum annual NDVI from MODIS?

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Vladimir Sentchilo

Run your contigs through any of the annotation engines (e.g. GenDB) and then use word search using KEGG or BioCyc pathways terms in combination with blasts to clarify and confirm the predictions.

Diego Santos-Garcia

Pathway-tools is your software. Not pretty, but incredible powerfull.

RAST annotation server is connected to SEED and is also a good option.

Saheli Ghosh

Thanks everyone....