I am trying to model a protein translated from a gene sequence. The best aligned sequence from PDB is only 34.6% similar. Upon modelling with chimera and modeller, the best 5 models all have GA341 1.00, and all have 91% in favorable region in ramachandran plot . However, the least the zDOPE score could get was 1.36 of all samples. Should the model be explored further.

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