Are there any software/pipeline for de novo assembly of bisulfite methylated DNA sequences obtained from Whole genome bisulfite sequencing (WGBS)?

23 January 2019 1 220 Report

I have whole genome bisulfite sequencing (WGBS) data for a species without reference genome. Is there any pipeline that I can use to process my data ?

Laxman Adhikari

Bismark may need reference genome, right? I found another one epiGBS that could better handle my case. Thank you for your response !

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Science method

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