Annovar or SNPeff for gene annotation?

Vrushali Kashinath Chimankar @Vrushali-Chimankar-2

01 January 1970 1 3K Report

What program is best for gene annotation for mouse genome. Annovar or SNPeff or both?

Hi Vrushali Kashinath Chimankar Both softwares you have mentioned requires input files in VCF format so take note. I have not worked with mouse genomes so I can't offer much help. Maybe this paper will help you out. Article Annotating individual human genomes

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Eutheria
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