In 23&Me files for personal genetics services, I found some genetic variants named like (i6033918) and the genotype is (II). What does this mean?
23 and me usually provides guidance on interpretation of the results for well established genotype-phenotype associations.
According to this file https://media.snpedia.com/images/5/5c/DNA_blast.pdf i6033918 in human build 37 was on chromosome 1
position 1147447. If it is rs774777119, it is an insertion/deletion (thus II coding) in
TNFRSF4 (TNF receptor superfamily member 4) gene causing frame shift thus potentially influential.
https://www.ncbi.nlm.nih.gov/projects/SNP/snp_ref.cgi?rs=774777119
I'm sorry, but I don't know this website.
I have a list of reference SNPs IDs (rsid) and I need to retrieve the associated diseases ... what are the suitable bioinformatics tools or databases?
01 February 2020 4,835 1 View
Can I phase VCF file after it has been generated ? Or I must have a phased BAM to get a phased VCF? Which tool is best used for this purpose?
09 October 2018 668 0 View
I have a gene list and want to map it to human diseases to know what are the most probable disease relates to my list. What is the best bioinformatics tool to do this job?
05 June 2018 3,581 1 View
I find different types of files in field of bioinformatics ... where can I find a complete list and description for these files?
02 March 2018 1,119 0 View
?
31 December 2016 9,682 1 View
I need a downloadable list of structures of activators and inhibitors of a certain enzyme ... where can I find a database containing this data ?
08 September 2016 325 4 View
I detected a set of patients that have a high response to a drug. Each patient has 40 different reads ( 20 nominal and 20 continuous) resemble certain genetic and expression variations. How should...
03 April 2016 422 3 View
Does anyone have an experience in getting Windows and Linux on the same computer (Laptop)?
10 November 2014 8,696 5 View
I need 3d structures of different alleles of the same protein.
10 November 2014 1,115 3 View
I need to download only the catalytic unit not all the enzyme seq.
05 June 2014 7,875 2 View
Hiiiii everyone! I have an enquiry on statistical analysis. I was looking for many forum and it's still cannot solve my problem. I want to compare means of two groups of data but only with two...
03 March 2021 8,796 3 View
I am on the lookout for the Enhanced Yellow Fluorescent Protein (Aequorea victoria) DNA sequence. Does anyone know where I can find it? Thank you in advance
03 March 2021 3,568 1 View
Hi, I want to start testing pitfall trap to obtain ants samples, but I need to conduct molecular analysis on those insects. So, what kind of fluid can I use? Ethanol expires too early and I need...
03 March 2021 5,978 5 View
What's the best way to measure growth rates in House sparrow chicks from day 2 to day 10? Since, the growth curve from day 2 to 10 won't be like the "Logistic curve" it might not follow logistic...
03 March 2021 1,401 3 View
I have conducted and published a systematic review and meta-analysis research with the topic related to public health and health pomotion (protocol was registed in PROSPERO). Now we want to...
03 March 2021 8,920 3 View
dear community, my model is based feature extraction from non stationary signals using discrete Wavelet Transform and then using statistical features then machine learning classifiers in order to...
03 March 2021 6,994 5 View
I just wanted to check if I need to run a linear regression separately if I am using PROCESS MACRO to run mediation analysis. Thank you.
02 March 2021 4,359 3 View
If the detection range is in ng/ml but the reference range is in ug/ml for a molecule or protein in serum or plasma .how to dilute and what is the initial volume to be taken for quantitative analysis
02 March 2021 7,670 3 View
Is There Any Feasible Method To Test The Efficiency Of Fluorescent Compounds Other Than UV Spectrometers ? Suggestions Would Be Appreciated !
02 March 2021 5,785 3 View
I am wanting to calculate the average trend in maximum annual NDVI in Iceland from 2010-2020 using MODIS MYD13Q1 V6. How would I do this? I have currently inserted the NDVI bands from the MODIS...
02 March 2021 752 2 View