11 Questions 13 Answers 0 Followers
Questions related from Arjun Sahoo
I have some Illumina sequence data. I want to check its quality using afterQC program but the problem is that AfterQC is running but no graphs are generating. Anybody could fix the problem.
09 September 2016 1,154 1 View
I am mapping the raw reads to the contigs generated by de novo assembly of the same reads and want to represent the read coverage in the form of graph..
09 September 2016 9,977 6 View
I am interested to study the microbial diversity of fish gut content. I am using QIAmp DNA stool mini kit for isolation of microbial DNA from fish gut contentas per manufacturers instruction, but...
05 May 2016 8,547 6 View
We are trying to get full cDNA using clontech's RACE kits (both 3' and 5' RACE) following the manufacturer's instruction for synthesis of 3' and 5' RACE but were not able to get the products....
02 February 2014 1,347 2 View
SNPs are abundant in the genome of any organism. We are in the process of SNP development through RNA-seq. We want to validate them by taking a panel of 48 unrelated individuals. The polymorphic...
08 August 2013 4,836 7 View
Since almost all the programs used for NGS data analysis are runing in linux environment, Linux (like Ubunto) is to be loaded in the PC.
05 May 2013 4,788 7 View
I am using Joinmap version 4.1 for linkage analysis in F1 mapping population using microsatellite markers. While analysing I was not able to calculate sex specific recombination frequency...
04 April 2013 8,626 0 View
Microsatellites are the choice of markers in many non model organisms for linkage map construction. I am working on a non model fish species and developed around 140 informative markers in order...
02 February 2013 4,222 6 View
I am working on construction of genetic map of a fish species using LINKMFEX software. Could any body guide explain why recombination frequency differes in Male amd Female parents and how to...
09 September 2012 6,091 0 View
Since its sequence information is not available which method should I follow?
04 April 2012 2,213 4 View
Linkage based QTL mapping is one of the hot topic now adays.
11 November 2011 8,398 1 View