I've implemented this method to simulate material and adjust dt for a target acceptance ratio. For a system of thousands of atoms I get a reasonable time step of ~2fs for an acceptance ratio of 0.3. However, when I perform the same simulation but with a system size of about 8K atoms, the time step drops to 0.8 fs.

I use the velocity Verlet algorithm as follows:

For each time step:

1- perform half-update velocities

2- update positions

3- compute forces

4- perform half-update velocities

5- update volume (in NPT ensemble)

I would appreciate some hints here.

Thanks you.

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