I have a set of data from wounds that are going through normal wound healing and those that have been treated to intentionally delay wound healing (n=3) in pigs. For normal/acute wounds, tissues were harvest at two timepoints: Day 5 and Day 10 from the point of wounding. For wounds with delayed healing, four timepoints were collected: Day 5, 10, 15 and 20 from the point of wounding. These wounds are all on the same pig and repeated twice on two other pigs. I would like to answer the question: Is wound healing significantly delayed in the treated wounds compared to acute wounds.
Initially, I just used an ANOVA to compare across all wounds and all timepoints but I'm not sure if this is the appropriate test to use. Should I be doing a pairwise comparison for each timepoint (eg. Acute D5 V Treated D5) instead of analyzing all the timepoints together (as acute does not have timepoints day 15 and day 20).