Probably every student of genetics knows the attached picture showing the probabilities of a certain base appearing at a certain position of a splice donor site, but what are the actual percentages that each base appears at each position?
Is this correct: http://www.life.umd.edu/labs/mount/RNAinfo/matrices.html ?
yes, normally this correct,
3' splice sites: CAG|G
5' splice sites: MAG|GTRAGT where M is A or C and R is A or G
also check in attached papers
Article Multiple gains of spliceosomal introns in a superfamily of v...
Article Spliceosomal Intron Insertions in Genome Compacted Ray-Finne...
Thanks a lot!
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