In recent project we would like to evaluate the expression level of VDR gene in Echinococcus granulosus . For primer design we need that primer and the accession number of mRNA for this gene.Thank you very much for your guidance.
Regards ,
Afshin
There are several options. This is the closest that I found.
EGR_01863 Nuclear receptor subfamily 2 group C member [ Echinococcus granulosus ] Gene ID: 36337578
According to The genome of the hydatid tapeworm Echinococcus granulosus. Zheng H, et al. Nat Genet, 2013 Oct. PMID 24013640
This gene has the following annotations: See Supplementary Table #28; EG_01863
Nuclear receptor subfamily 2 group C member 2 F:vitamin D receptor binding; P:response to selenium ion; F:zinc ion binding; F:steroid hormone receptor activity; P:cellular response to insulin stimulus; P:ventricular cardiac muscle tissue morphogenesis; P:retinoic acid receptor signaling pathway; P:secretory columnal luminar epithelial cell differentiation involved in prostate glandular acinus development; P:response to vitamin D; P:response to retinoic acid; P:vitamin metabolic process; P:aging; P:positive regulation of gene-specific transcription from RNA polymerase II promoter; P:cholesterol metabolic process; P:midgut development; F:ligand-regulated transcription factor activity; P:placenta development; F:retinoid-X receptor activity; P:response to organic cyclic substance; P:negative regulation of cell proliferation; P:response to glucocorticoid stimulus; P:female pregnancy; P:axon regeneration; P:negative regulation of gene-specific transcription from RNA polymerase II promoter; F:transcription coactivator activity; C:axon; F:steroid binding; F:transcription factor activity; P:inflammatory response; P:cardiac muscle cell proliferation; P:ventricular cardiac muscle cell differentiation; F:double-stranded DNA binding; F:vitamin D response element binding; P:regulation of branching involved in prostate gland morphogenesis; P:liver development; P:positive regulation of apoptosis; P:interspecies interaction between organisms; C:transcription factor complex; P:signal transduction
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