Hello scientists,
Hope you all will be in good health.
I have a query regarding my blastn result of bacterial sequence. when I blasted the aligned sequence on NCBI the result showed 100% match with query length and %identity, how is this possible? What should I do now?
Need your experienced suggestions.
Thank you.
What is that you want to ask?
And for the text in your post, one can suggest you look for some basics and fundamentals before jumping into doing and interpretation of analysis which you are not familier with.
Dear Abhijeet Singh,
Is it possible that your sequence shows a 100% match with the database?
My sequence shows 100% similarity with the Pseudomonas migulae which is not yet reported from Crop, (nor in my country nor worldwide) from which I have isolated the pathogen. The most prominent causal agent is Pseudomonas corrugata- with which my sequence is showing a match of 97%.
I don't know what you are doing or how you are doing blast. But there are genome sequences available for Pseudomonas migulae.
If you are having problem in performing or understanding blast, please learn fundamentals before performing analysis.
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