To find out a drought tolerant genotype of tomatoes, I want to know the drought linked markers. I couldn't find any study that provide me information about drought linked markers of tomato. Is there any study or database that give me this information.
hello,
like I didn't worked on drought tolerance in tomato but for salt tolerance here is one publication Article SSR marker-assisted screening of commercial tomato genotypes...
here are some publications which I referred while working on eggplant for drought tolerance.
*go for SSR sequence BLASTn or FAST-PCR for confirmation with tomato genome
- JELLAN, R. R., SARACANLAO, E. T. M., OCAMPO, A. O., CANAMA, S. J. B., ANADAY, R. G. M. AND EVELYN, F. D., 2016, SSR-based genetic relationship in eggplant (solanum melongena L) genotypes with varying morphological response to drought. Philippine J. Crop Sci., 41 (3): 57-64.
- MIKAELA, A. B., OCAMPO, E. T. M., CANAMA, A. O. AND DELFIN, E. F., 2017, Hybridity testing of eggplant F1 progenies derived from parents with varying response to drought using SSR markers. Philippine J. Sci., 146 (3): 277-286.
Thank you. Mahammed Faizan for your answer.But I need drought linked markers of tomato.
Tomato genome is sequenced, you can get information easily anywhere.
From NCBI - gene information (total 35 genes) identified till date and you can design yourself.
Please see this paper, they mention with reference.@Article Application of Genome Editing in Tomato Breeding: Mechanisms...
All the best
Rizwana Begum Syed Nabi Thank you for giving time. Can we get information of specific stress genes of tomato from NCBI? As you mentioned that there are 35 total genes (Perhaps you tell about drought responsive genes). If we can search these specific genes of tomato, please tell me the way, How can I search for such genes?
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