Is there a plug-in to draw haplotype networks from Geneious directly?

More Amaël Borzée's questions See All

Circular statistics - ecology - softwares, methods and recommendations?

Dear everyone, I have a dataset on the migration pattern of amphibians, including the angle at which the movements were initiated, and the distance covered. I am interested in finding out if...

10 November 2017 6,637 2 View

Phylogenetic analysis with PhyML or RaxML? or other?

I have one 560-bp long sequence for about 400 individuals. I understand that PhyML is faster, able to run with several model types, but non-partitioned, while RaxML can run with partitioned GTR...

09 October 2017 8,382 9 View

For 60+ year old tissue samples, potentially fixed in formalin, but preserved in alcohol, what is the best DNA extraction method?

I have old samples that may have been fixed in formalin, or not, there is no way to know, and then preserved in alcohol. I'm afraid the DNA extraction protocol for samples fixed in formalin may be...

03 April 2017 8,443 14 View

Hi! Would you want some data points from South Korea?

I'm conducting amphibians surveys in rice paddies in South Korea and I come across Black-faced Spoonbills quite regularly. I took note of all sightings from 2016, and I can send you all the data...

01 January 1970 9,511 1 View

MD MOE RMSD

How to calculate the RMSD values for a MD simulation using MOE?

07 August 2021 0 0 View

MD MOE RMSD

How to calculate the RMSD values for a MD simulation using MOE?

07 August 2021 0 0 View

fatal error

When I tried to energy minimization my system, I got fatal error as below. Fatal error: Atomtype opls_116 not found Although I've already added this line: ; include water #include "oplsaa.ff/spc.itp" to [molecultype] directive in my topology.

16 June 2021 0 0 View

fatal error

16 June 2021 0 0 View

fatal error

16 June 2021 0 0 View

fatal error

16 June 2021 0 0 View

Enhanced Yellow Fluorescent Protein (Aequorea victoria) DNA sequence?

I am on the lookout for the Enhanced Yellow Fluorescent Protein (Aequorea victoria) DNA sequence. Does anyone know where I can find it? Thank you in advance

03 March 2021 3,568 1 View

Resistor definition in Piezoelectric bimorph with ANSYS workbench

Hello, good day! I am trying to simulate similar bimorph piezoelectric harvester with below commands. However, the output power doesn't change with resistor value. Please help to find the reason. ET,10,CIRCU94,0 !SET UP RESISTOR R,1,100000 !RESISTANCE VALUE TYPE,10 !SET ELEMENT TYPE E,1,2 !CREATE RESISTOR BETWEEN NODES 1 AND 2 Thanks in advance Regards,

02 March 2021 0 0 View

Why are the velocities so high in my Boussinesq approximation Fluent simulation?

Hello, I have a mechanism where air rises due to convective flows. In this simulation, nothing is driving the air except this. I understand that the Boussinesq approximation only works for small...

02 March 2021 4,910 3 View

What is the characteristic length to determine the Reynolds number for the scattered turbulent fluid flow?

Dear all, I just saw this example in FB on the difference between laminar flow and turbulent flow. The flow from a pipe hits the sink and scattered. The flow from the pipe is characterized as...

02 March 2021 1,999 5 View

Sergio N. Stampar

I've searched and apparently it does not exist, unfortunately.. :(

Amaël Borzée

I reached the same answer, thank you for the confirmation. It would have been so convenient though!

Sadly, the latest version, Geneious 11.0.2, does not seem to be able to draw haplotype networks either.

Mohammadmehdi Eslamieh

I was looking for the same thing and it is NOT there!

I am hoping it will be integrated in a future (and hopefully soon) update...