If doing part time PhD from a University and publishing PhD research with affiliation of working place. Can it be counted as PhD research?

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Dean Whitehead

As Neil suggests - you should check the institutional policy/practice. Some institutions allow you to include a full publication (especially as a portfolio) within a thesis, others part of it - and others, again, allow you to refer to and cite the publication - but it does not replace the word count.

Mohammed I. Rushdi

According to university, for my university, any published wor considered apart of the thesis.