I am currently doing my final year project and so i am using autodock tools. But the display on my laptop doesn't seems right as it is grainy and dark. I couldn't see my receptor clearly.
Dear Vivace Khor,
You may use Autodock/Vina plugin for PyMOL.
http://www.mybiosoftware.com/autodockvina-plugin-pymol.html
http://wwwuser.gwdg.de/~dseelig/adplugin.html
Thanks.
Best wishes,
Sk. Abdul Amin
Try.
Ctrl D (this would render the display brighter)
Hope this would solve the issue of image rendering.
Sorry to reopen an old thread... I have never had this type of problem here until I had to format my hard drive and install windows 10. Now I am having this issue too. Did you manage to solve it?
Thank you!
The problem is with integrated intel graphic processor, if you have another graphics processor in your laptop, you can switch to that. Browse to MGLtools folder in c drive, change the default graphic processor for python.exe to other graphics processor instead of default integrated one. This will solve the problem.
thank you! I'll have a look now and switch to my GPU. It must have been resetted when I had to format the HD :\
Thanks again!
Saurabh Loharch problem solved! It was as you said: for some reasons Autodock was using the CPU instead (i guess once I installed the drivers again the GPU manager decided that python didn't need a GPU...fool!) Thank you again!
Ludovico Pipito Could you explain how you were able to solve that? I am having the same issue, and I'm sure that it is using my CPU instead of my GPU. I have located the mgltools folder, but am not sure what to do from there?
Ricardo Colón left click on the file icon and "run with GPU". If your card allows it, you can set the GPD as default.
Marie Hoarau
Hi, where should i set the precomputed lighting? can you explain more. Thanks
Ok guys, I will explain how to solve this problem (in more detail): Go to your graphic processor settings, usually you can reach it from desktop, by right clicking and click on graphic card control panel( for example, in my case its Nvidia control panel). Or you can also reach your graphic card settings through notification area. Once you are in graphic card settings, go to program settings, in there add new program by browsing to python.exe file which is present in mgltools folder in c drive. and change the graphic card setting to nvidia instead of default intel graphic processor. I hope this will help you. :)
Ctrl+D is the simplest but effective solution to this issue. I am using ADT in Ubuntu 14.
- Badges
- Science topic
- Similar topics
- Engineering
- Modeling