How to retrieve coding sequences present on a particular chromosome?

24 February 2017 1 144 Report

Hi everyone,

I want to retrieve the sequences of all protein coding genes that are present on a particular chromosome of a species. Suppose, chromosome 23 of human. Is there any gene browser available for this? Or is there any computer program coding written for the same?

If anyone has done this before or if has an idea about how to do it, then kindly guide me.

Thank you in advance!

Niloofar Aghaieabiane

you may want to use ftp://ftp.ncbi.nlm.nih.gov/

file with the extension ".faa" are protein coding region, have fun!

Badges
Science topic

More Minal Jamsandekar's questions See All

Can someone who knows the authors, review their article under blind peer review?

shouldn't they deny reviewing it?

08 December 2023 7,509 4 View

In Pernicious Anemia, why women are mostly affected then men?

What are the reasons behind that women are mostly effected with Pernicious Anemia other than men?

24 October 2023 4,990 0 View

Flowcytometry for patient samples?

I am measuring the expression of a protein in immune cells from patient and healthy volunteers. How is the data from different donors combined if each sample is run independently?

11 May 2023 4,262 0 View

How to publish an action research?

Hi, I have conducted many action research on the classes that I taught. I wrote some of them and I am wondering how to publish them? All my action research is about teaching Arabic as a forieng...

23 March 2021 3,612 7 View

Probit analysis of dose-response assay?

I have observed that the regression analysis of log conc vs probit (%mortality) in ms-excel can provide you the values for anova, r^2, se, intercept and slope but the values for intercept and...

28 August 2020 5,517 4 View

Why in some papers people have shown one jcpds card no. for two different metals?

most people have shown I their research articles that the intensity peaks of different metals like ag, au and even pd have their peaks on the same degrees i.e. nearby 38.2, 44.2,64.6, 77.5 degrees...

05 August 2020 7,930 4 View

Can anyone provide me all the reference JCPDS cards for ag, au and pd?

I need these reference cards to match them with my data. if you can help then kindly provide the pdf files or even images for each card. I do have one reference card for each but it lefts me the...

05 August 2020 6,376 4 View

Removing product from water layer?

Hi everyone, I'm trying to separate the water from my crude product. I have tried to increase the pH a bit but to no avail. Workup of my crude product was also futile as my crude continued to end...

14 February 2020 375 2 View

SEM-EDX for nanoparticles coated fabric?

I have to done use SEM-EDX for the imaging and elemental analysis of a fabric coated with metal nanoparticles. Do i have to sputter coat the fabric with is coated with nps ? Can i take the SEM...

04 June 2019 568 5 View

Is there any image enhancement technique by which I can analyse the forehead’s cutaneous tissue from a thermal image attached as follows?

I am working on a project of Lie detection using thermal image analysis in which I am successfully able to detect lies using peri-orbital regions. Now I wish to extract thermal patterns of...

12 March 2018 9,964 4 View

How to learn more about SPSS and its Application?

I would like to learn more about SPSS and Its application especially in regards to data analysis. Please suggest me how I can learn more about it. Thank you so much.

11 August 2024 9,101 4 View

Can I base on reverse DNA sequences to perform alignment, convert to amino acids and GenBank submission?

I have reverse sequences (AB1 format), can I base on reverse DNA sequences to perform nucleotide alignment, convert nucleotides to amino acids and deposit the sequence in GenBank database?

11 August 2024 5,138 1 View

Baseline drift in HPLC? What causes this?

Hello, Why do i see this baseline drift when i compare my blank (black) to the sample (blue)? Any suggestions as to why this happened? Thank you!

11 August 2024 3,770 4 View

Text-Communication from the M1 Hand Area using BCI—and then there is Elon Musk?

Willett, Shenoy et al. (2021) have developed a brain computer interface (BCI) that used neural signal collected from the hand area of the motor cortex (area M1) of a paralyzed patient. The...

10 August 2024 7,180 0 View

Has anyone applied Python in the field of textile engineering for data analysis, automation, or smart textiles?

I'm currently exploring the application of Python in textile engineering, specifically in areas like data analysis, process automation, and the development of smart textiles. I'm interested in...

10 August 2024 7,429 2 View

How can I use the cif data obtained from rietveld refinement extracted via gsas2, for microstructural analysis using ETEX software?

09 August 2024 7,718 0 View

How are iso-frequency contours plotted?

Let's say we have a standard, regular hexagonal honeycomb with a 3-arm primitive unit cell (something like the figure attached; the figure is only representative and not drawn to scale). The...

07 August 2024 1,937 1 View

How to prepare the nanoparticle treated fungal sample for Environmental SEM analysis?

A fungal strain was treated with nanoparticles. We want to do an environmental SEM analysis. So could anyone share your views on preparing the sample? Thank you.

07 August 2024 5,307 1 View

How to normalize and take the significance of the MTT OD values with 3 replicates for the same cell-line?

Hi, I have a question about normalizing the MTT OD values for doing the statistical analysis. So, if we have 3 different plates and we call them 3 different replicates, so, first we would...

07 August 2024 8,106 4 View

Why does my protein refolded to beta sheet during thermal denaturation analysis?

Hi! So i attempted to understand a novel protein behavior towards heat application by analyzing its secondary structure change. I subjected the protein to a thermal denaturation analysis using...

06 August 2024 1,989 3 View