How to plot 2D-PMF for the reaction mechanism?

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Veli-Matti Taavitsainen

Dear Violet,

You can use e.g. R (it's free). See for example

http://mdtoolbox.readthedocs.io/en/latest/alad_ksdensity.html

BR,

Veli-Matti

Pitchumani Violet Mary C.

Thank you, Veli-Matti Taavitsainen for your valuable suggestion.

Actually, I have done all my calculations quantum chemically using a Gaussian software.

Is it possible to plot 2D-PMF for my calculations or is there any other plot similar to that which I have mentioned?