I am working on SSR markers.I have used Genodive software for analysis of tetraploid data. To check the genetic differentiation in 12 populations I applied AMOVA and the result file has attached. What conclusion I can make from this? Also does the sample size of a population would alter the result?
According to me just data clearly indicate that maximum variation and diversity was observed within the individual with a value of 0.816 comparing it with among population , among individuals and among the group and if you add all of them it comes to one so maximum diversity is shown with the individual
Geethika .E most of the diversity is observed within individual followed by among individual. The %var could help you as well as the %ci2.5 and 97.5%. However, the pvalue is less < 0.001 I will suggest you check the gel scoring since this is tetraploid or use GeneAlex for cross-checking
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