If you mean to fix all backbone torsions, I can send you some of my scripts that can add this to a topology file. Kindly let me know if you are interested.
Mohammad Madani I have not used the scripts to fix angles and dihedrals.
For fixing in position I used freeze option in GROMACS
We are currently working from home due to coronavirus situation, once I get access to my desktop I will try to find the scripts Zoltan shared. But not sure when that will be.
Hi all, can anyone please share the script? I also face the same difficulty.
If its difficult to retrieve the script, can someone please advise on how to go about this issue. Should we include restraint statement in the itp file for all angles and dihedrals?