How to find the promoter sequences of any gene?

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Andrey S Bavykin

Hi Binod,

Try this database:

http://epd.vital-it.ch/

Rahul Nitnavare

From NCBI you can retrieve promoter sequence.

1.Search your gene on NCBI and go to graphics and there you will find "TOOLS" tab just click on it.After that you will get some options in that go for "sequence text view".

Copy upstream region of gene.

Dr Binod Kumar Yadav

Thanks alot...but the both ways gives different sequences..so which can be selected for the best.

As per Andrey;this is the sequences..FP004907 Stmn1_1 :+U EU:NC; range -499 to 100. TCACAGGGTTTCGGGCGTTTTAGGCGACCGGGAGGGGTATGGCATCAAAAGGGATATTGCTTAGGGAGCCAAATAAACTCCTATGGCTGGGTAGAGGTAGAGTCCAGTCGGTCGAGGTCTAAAAGAAGTAGGTTAGGACCGACCCCTCCCCTGCTCCTCACCTCGCCCTGCAGTTTTCCTAAAGAGAGTCCCATAACCGATTCAGTCCTGCGGCCGCAGCCAAATGCTCTTCCGATCAGAACACCCCACCCACCCACGCTAGTCCCGGCTAACACCTAGAGAGACCCCCCACCAGGAGTGCCCCACCCCTAGCATTGTCCTCCTGCCCCCCTGGCCCGGACTACAATTCCCGAAATGCTTCTCTCCAGAGAGGCGGTGCTCTCCAGGCTTCGGGGCGGGACTGGCACGTGCCGTCACCCGCAGCCAATGCGGAGCGCCTGGTCTGGGTCACGTGCCGCTGTTTGGCGCTTTTGTGCGCGCCCAGGTCTGTTGGTGCTCAGAGTGTGGCCAGGCGGCTCGGACCGAGCAGGTGGGTGCAGGCTTGGCTTAGGCGGAGGCTACGGCGGGCTGGGGAGCAGCCGGGAACGCGGCGGGTCCCC and as per Rahul..this is the sequences: GCAGCCAATGCGGAGCGCCTGGTCTGGGTCACGTGCCGCTGTTTGGCGCTTTTGTGCGCGCCCAGGTCTGTTGGTGCTCAGAGTGTGGCC AGGCGGCTCGGACCGAGCAGGGCTTTCCTTGCCAGTGGATTGTGTAGAGTATACAGCCAGTCTCTTGTCTTCTGTTCGAC..please suggest..

What is the range for the 2-nd variant?

There is single variants..............