What program can I use to evaluate two images from an optical microscope, e.g., before and after methylene blue staining. I would like to quantify the degree of staining of cells with a dye. Perhaps by evaluating pixels? Please help
ImageJ. The FIJI distribution has a nice set of prepackaged add-ins for microscopy and an auto-update feature. https://fiji.sc/
Ron Reiserer, thank you for your valuable advice.
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