Hello, everyone. I found the bacteria I cultured can be inhabitated by another bacteria when I culture then together in the plate. Now, I want to analyze which metabolite contribute to the inhabitation. How can I design the experiment? At first I want to culture bacteria A, B, A+B, and analyze intracellular metabolties, but I have no idea about data analysis, how to get differently experssed metabolites which is the target metabolite?
Can anyone give me some advices? Thank you so much.