I have also the Orfs.
Nowadays, this biopythin workflow is very helpful
http://biopython.org/wiki/Intergenic_regions
I am using 1% Ga cacodylate-filtered buffer for quick hard fix of my phage sample to grid then perform negative staining by 2% uranyl acetate. But the phage picture look like empty. Does it mean...
07 August 2016 8,253 5 View
I have 9 recombinant GST-tagged proteins. Maximum proteins formed inclusion bodies. I use one kit for solubilization and renaturation. It works well but problem is in elution. Proteins not elute...
09 October 2014 8,456 21 View
I used GST gene fusion system (pGEX-6P-1) for protein expression and found all of my recombinant proteins deposited in the form of inclusion bodies. I changed the conditions (IPTG conc, induction...
07 August 2014 5,266 0 View
Hi everybody In the ped format for genotype, alleles of any SNP are represented by two columns (one for each allele, separated by a space). Is a column sufficient for the haplotype to...
27 February 2021 1,965 1 View
I am currently working on gene clustering based on co-expression pattern in mouse brain. The problem is I do not have some solid way to test my result. Are there any suggestions for databases...
22 February 2021 4,374 3 View
Hi Dear researchers In ensemble-based architectural design Which algorithms are more useful for classification? What is the difference between parallel and ensemble architecture? Thanks I am...
08 February 2021 2,727 5 View
Dear community, As far as I understand, negative density features point at stuff that is in the model, but not supported by experimental data. However, in many cases (e.g. attached image), when...
06 February 2021 2,847 2 View
Hi, I am working on some 16S sequencing data, and seems some of them are low quality. I am not sure how to set the trunc value in dada2. qiime dada2 denoise-paired \ --i-demultiplexed-seqs...
30 January 2021 6,213 3 View
I am trying to measure telomere length in an ant species using the TRF method, which is a Southern blot technique. Currently, I am struggling with analyzing the images and would appreciate any...
29 January 2021 604 3 View
I want to find a database(s) or a method where I can find and bulk download all the rabbit MHC genes and domain annotation. In humans using Ensembl, all MHC genes have names and domains but in...
28 January 2021 7,722 2 View
I am working on a ligand that is co-crystalized to parotein, but the ligand is missing some residues that makes it appear as if it was separated into two ligands! what I need is to connect them...
23 January 2021 3,975 7 View
bioinformatics has a big importance in human science and lots are seeking to study that field, so it attracts me to know it's relation with poultry science and how we can benefit from it in...
20 January 2021 6,963 3 View
I'm looking for a bioinformatics website to get the chromosomal location of a radish gene id list, but in one shot instead of doing it gene by gene. Is there a way to do this? Thanks
17 January 2021 8,810 3 View