Hi! I can't find the NAD4L and NADH6 genes in a molluscan (Lower heterobranchia) putative mitochondrial contig assembled with Geneious and SPADES assemblers. The contings have 12,090 pb approx and I could find others CDS and the 2 rrnL, ATP8 included. I tested the annotation with MITOS 2 and two other (with worse performance than MITOS) gene annotation software and they found low numbers of genes that I found manually. And my species does not have a mitogenome in GB of a related or close species.
I really appreciate any help you can provide. Thanks