I am trying to figure out how to use MitoSox green to measure the superoxide levels in human cerebral microvascular endothelial cells (HCMEC). For most ROS kits you can use a microplate reader to measure the amount of ROS expression with the cells. I wanted to use the MitoSox Green superoxide indicator as our microplate can only read up to 510 for excitation. The problem I am trying to figure out is that does the MitoSox Green work when using a plate reader. The protocol provided recommends using a 1 uM concentration, but the literature shows that many people using endothelial cells use a 5um concentration (for either Mitosox Green or Red). If I want to conduct the experiment at 5uM I have to use few wells as I only have 1 vial with 9mg of MitoSox that I have to dissolve in 10 uL to make a 1mM of stock before diluting further to solution. Do I use the recommended 1 uM or should I use concentration use by prior studies (5uM). The other aspect is imaging. Since I want to run this on a 96 well plate, I can image the wells using a flourescent microscope under a GFP filter. Can I use one plate to do both or should I do I plate for the plate reader and a chamber slide for the flourescent microscope. I do have a plan to do everything. I just want to make sure I am doing this correct unless someone has any advise to conduct this experiment better and more efficiently.

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