Hey,
I need WGS simple variation data for breast cancer patients for example.
Can I find in the PCAWG a single file with the mutations of all the breast cancer patients?
Additionaly, are these files open-access?
I have found a file called "final_consensus_passonly.snv_mnv_indel.icgc.public.maf.gz" that seems to have what I want (downloaded from https://dcc.icgc.org/releases/PCAWG/consensus_snv_indel/) but I didn't find additional information about it, so I dont know enough about th origin of the mutations in this file..
Thank you very much!