I am currently doing micronucleus assay in cancer cells.

I am wondering on how to calculate the frequency % cells with micronucleus from the images I collected and the best approach to calculate the error (standard deviation) and significance.

Some image-based analysis use the ratio of the positive/negative cells per image, some other using the total cell number instead of ratio per image. Which method should I use for micronucleus assay?

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