Fatal error when using pdbgmx to run NRAS bound with GTP using GROMACS 4.6.7?

I have tried to run simulation for protein complex of NRAS(5UHV) bound with Mg and GTP. However I have encountered the following error while using pdb2gmx: Program pdb2gmx, VERSION...

18 December 2019 2,246 3 View

How to get vehicle count and dataset from any one Toll plaza in India, or my research?

I wish to collect real time traffic in India. Is it feasible to get such data through any toll gate ?

04 May 2019 8,521 3 View

Can anybody having the supplier contact details for Nickel Aluminium Bronze alloys?

Dear sir, I am doing research in Nickel Aluminium Bronze alloy so I am in need of the supplier contact for getting the materials. I have contacted so many persons through Indiamart also. If...

20 February 2019 3,891 5 View

What is the best method to mass rear rice yellow stem borer?

Dear delegates I wish to get some information on rearing techniques of rice yellow stem borer. I started doing the same on natural host. But i face difficult and also feel cumbersome in doing mass...

02 July 2017 9,959 25 View

PSI-C method for one way coupling in fluent

11 April 2017 4,791 1 View

How to solve mixed level design in Minitab 17?

To Solve mixed level design with 3 factors and factor 1(6 level), factor 2(5level), factor3(4-level), I have used Minitab general design Full factorial -with 2 replications, totally 240...

01 February 2017 9,282 9 View

Can you please sugest a free software for the analysis of powder XRD?

want to compare the bond lenth and angle obtained from DFT with the parameters obtained from the XRD.Many paper shows that they obtained parameters from the powder xrd itself.please suggest me...

07 September 2015 3,355 6 View

What is the standard method to perform insilico mutagenesis?

28 July 2015 9,677 4 View

What is the importance of the shape and size of the simulation box in a molecular dynamic simulation?

13 May 2015 2,676 4 View

How do I place equally distributed replicas of protein in the simulation box?

I am trying to perform protein aggregation studies using GROMACS. How can I put 20 or more replicas of the protein which are equally distributed in the simulation box?

04 March 2015 2,072 1 View

Does anyone know HRM channel in a 2 plex QIAGEN Rotor- Gene Q qPCR can be used as a separate channel?

I am going to have 3 different probes in my qPCR work that I am going to do. But I realized that the machine we have in the lab is a Rotor-Gene Q 2plex HRM Platform, saying it has green, yellow,...

01 March 2021 8,544 1 View

Is IMPACT FACTOR justified in case of Taxonomy?

There is huge pressure of getting good impact factor on scholars now a days. On the other hand Taxonomy is a very dry subject and the concerned papers can only get citation in same group of organism.

26 February 2021 5,851 1 View

Uncertianiny in using dry or wet basis in mixing a sediment with fuel oil?

Hello I'm currently working on a topic related to studying the anaerobic biodegradation of TPH in marine sediments. In this work, sediment should be mixed with fuel oil to a concentration of 20 g...

24 February 2021 9,839 3 View

Standard curve shifting over time. How do I stabilise the ELISA?

24 February 2021 1,365 3 View

How can I selectively dry etch Ti on a polymer substrate?

24 February 2021 5,378 1 View

How to reduce static electricity of powder after lyophilization?

I am working on synthesizing and then purifying peptides using the SPPS system. After purification of the peptide, the peptide powder is obtained using a freeze dryer. When measuring the powder,...

22 February 2021 10,099 5 View

Amorphous silica XRD peak at around 10 degree?

21 February 2021 3,417 5 View

Plant research: Watering uniformity/consistency. How important is it?

Trying to gather insight from an unresolved discussion with a colleague here, and either the available literature surrounding this topic and/or my keywords in search of are lacking. Context:...

21 February 2021 6,389 3 View

How to dissolve lyophilized silk fibroin?

Dear members of the community, I am trying to concentrate silk fibroin to 25 % (w/v). Nevertheless, i am struggling with the concentration step. I successfully achieve concentrations of 5-6 % of...

16 February 2021 1,808 1 View

How does a freeze dryer destruct your solid sample?

Several times I lost my sample during freeze drying. There was no solid or powder in the vial after freeze drying. I'm sure sample contained solute because i took its NMR spectrum. I covered the...

15 February 2021 6,749 2 View